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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864776.1_cds_XP_016516110.1_28387
CDS Infomation

[gene=LOC107832751] [db_xref=GeneID:107832751] [protein=4-hydroxyphenylpyruvate dioxygenase-like] [protein_id=XP_016516110.1] [location=join(32561..33164,33765..34317,38017..38203)] [gbkey=CDS]
Sequence

ATGGGCAAATTAGAAACTGTCACCACCACCTCTGCTGCCGCCGCCGATGACTCGCCGGAG
CTGACCACCAATTTCAAGCTAGTGGGGTTCAAGAATTTCATTCGAATCAATCCCCGTTCC
GATTTTTTCTCCGTTAAACGCTTCCATCACATAGAATTTTGGTGCGGCGATGCTACCAAT
ACGGTTCGCCGTTTCTCTTGGTCTCTGGGGATGCCAATTGCAGCTAAATCCGACCTCTCC
ACCGGAAACTCCGTTCACGCTTCGTACCTCCTTCGTCCCGTTTCAGGTTCGCTTCAGTTT
CTCTTCACTGCTCCTTATTCGCCGTCTATTTCGACGCCGTCATCTGCAGCCATCCCCAGT
TTCTCTACTTCCGTACACCGCTCTTTTACGGCAACTCACGGGCTCGGCGTCCGTGCCGTT
GCTTTGGAAGTGGAGAATGCTTACACGGCGTTCTCCGCGAGTGTTTCACGTGGGGCGAAA
CCCATGTTTGAACCTGTGACTATTGATGAACGAGTCGCGGTGGCTGAAGTTCACTTATAT
GGCGACGTCGTTTTGCGGTTTGTGAGCTATCTGAAAGATGCGGACAGCCTCGTTTTCCTT
CCAGGTTTCGAGGCCATGGATGAAACAGCATCGTACAAAGAACTGGATTATGGGATTCGC
CGGCTGGACCATGCCGTTGGGAATGTGCCGGAGCTGGGTCCTGTAGTGGATTATATCAAG
CGCTTTACGGGGTTTCATGAATTTGCTGAGTTCACAGCTGAAGATGTTGGGACTGCTGAG
AGCGGGCTGAACTCTATGGTTCTGGCAAACAATGACGAAACAGTACTGCTTCCGTTGAAT
GAGCCGGTTTATGGAACTAAAAGGAAGAGTCAAATTCAAACGTATTTAGAGCACAATGAA
GGGGCAGGAGTGCAACATTTAGCTTTGGTTACAGAGGATATATTCAAAACATTGACGGAA
ATGAGGAAAAGGAGTGGAGTTGGGGGTTTTGAATTCATGCCTTCACCTCCGCCTACTTAT
TATAAGAATTTGAAGAATAGGGCAGGGGATGTATTGACTGATGAACAGATTCAGGCTTGC
GAAGAATTGGGAATATTGGTGGATAGGGATGATCAGGGGACCCTGCTACAAATCTTCACC
AAGCCTGTGGGGGACAGGCCAACAATATTTATAGAAATAATTCAGAGAATCGGTTGCATG
CTCAAAGACGAAAAAGGACAGGTGTATCAGAAGGGCGGCTGTGGAGGCTTCGGAAAGGGA
AACTTTTCAGAGCTCTTTAGATCCATAGAGGAATATGAGAAGACGCTTGAAGCCAAACAA
GTTAATCAAGTTGCTGCTGCTTGA

Peptide Sequence

PEP ID

XP_016516110.1
PEP Infomation

PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Nicotiana tabacum]
Sequence

MGKLETVTTTSAAAADDSPELTTNFKLVGFKNFIRINPRSDFFSVKRFHHIEFWCGDATN
TVRRFSWSLGMPIAAKSDLSTGNSVHASYLLRPVSGSLQFLFTAPYSPSISTPSSAAIPS
FSTSVHRSFTATHGLGVRAVALEVENAYTAFSASVSRGAKPMFEPVTIDERVAVAEVHLY
GDVVLRFVSYLKDADSLVFLPGFEAMDETASYKELDYGIRRLDHAVGNVPELGPVVDYIK
RFTGFHEFAEFTAEDVGTAESGLNSMVLANNDETVLLPLNEPVYGTKRKSQIQTYLEHNE
GAGVQHLALVTEDIFKTLTEMRKRSGVGGFEFMPSPPPTYYKNLKNRAGDVLTDEQIQAC
EELGILVDRDDQGTLLQIFTKPVGDRPTIFIEIIQRIGCMLKDEKGQVYQKGGCGGFGKG
NFSELFRSIEEYEKTLEAKQVNQVAAA

Transcript Sequence

Gene sequence data has not been registered.